2 Commits

Include renames

Author	SHA1	Message	Date
Matiq	ea8f531211	all transcripts via Ensembl REST (expand per variant, pan-cancer) ... - vep_annotate now iterates all transcript_consequences - timeout 15s, graceful fallback to single placeholder row	2026-09-06 20:20:48 +03:00
Matiq	a3589279b9	annotate clean variants: Gen/HGVS/Effect + ACMG + AMP/Onco pan-cancer -> Excel ... - all transcripts mode (VEP no_pick fallback to best transcript via Ensembl REST) - HGVS c.6713C>T p.(Pro2238Leu) style, Type/Effect, VAF, PAF(empty), ACMG ClinVar+InterVar (VUS placeholder), AMP/Onco via OncoKB (token ~/.config/oncokb/token, tumor_type All Solid Tumors) - Excel .xlsx styled (color by ACMG/AMP, filters, frozen header)	2026-09-06 19:19:19 +03:00